ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 488.00 0.38 0.95 100.0 RABGGTB-213 protein coding CDS not defined tongue (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 29753.00 62.76 57.99 100.0 GNL3-211 retained intron tongue (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 7519.00 15.86 14.66 100.0 GNL3-211 retained intron tongue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 8478.00 69.77 16.52 100.0 RPL5-205 retained intron tongue (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 1.00 0.01 0.00 100.0 RPL5-205 retained intron tongue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 1153.00 9.49 2.25 100.0 RPL5-205 retained intron tongue (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 111.00 4.55 0.22 100.0 ZBED9-AS1-201 lncRNA tongue (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 31304.00 86.99 61.01 100.0 RPS3A-206 retained intron tongue (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 40525.00 88.43 78.99 100.0 COX7C-203 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 924.00 0.27 1.80 100.0 RACK1-229 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 272453.90 80.18 531.03 86.37 RACK1-229 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 5788.00 1.70 11.28 81.92 RACK1-229 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 39948.82 11.76 77.86 17.57 RACK1-229 protein coding tongue (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 298299.00 84.19 581.41 97.71 RACK1-230 retained intron tongue (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 46930.00 13.25 91.47 65.56 RACK1-230 retained intron tongue (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 114.00 12.84 0.22 100.0 RNA5SP486-201 rRNA pseudogene tongue (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 2837.00 86.94 5.53 100.0 SCARNA5-201 scaRNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 4668.00 2.89 9.10 95.17 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 112.00 0.07 0.22 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1377.00 0.85 2.68 44.75 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 11184.00 6.92 21.80 88.38 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1217.00 0.75 2.37 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 7555.00 4.67 14.73 74.12 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 349.00 0.22 0.68 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 455.00 0.28 0.89 62.24 RNY4-201 misc RNA tongue (Tissue)