ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 40.00 0.10 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 343.00 0.88 0.45 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 633.00 1.63 0.83 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 364.00 0.94 0.48 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 1740.00 4.49 2.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 3748.00 0.10 4.94 59.14 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 7556.00 0.21 9.97 66.25 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 41262.00 1.13 54.43 96.81 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 2815.00 19.52 3.71 61.95 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 2532.00 89.85 3.34 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 452.00 14.59 0.60 73.98 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 286.00 84.62 0.38 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 387.00 0.22 0.51 22.82 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 1309.00 0.76 1.73 77.18 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 54490.00 31.49 71.88 70.85 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 4996.78 14.65 6.59 28.98 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 17153.37 50.30 22.63 78.71 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1606.00 4.71 2.12 68.66 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 469879.00 89.28 619.80 97.01 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 687.00 2.88 0.91 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 4943.00 16.32 6.52 86.76 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 264.00 0.05 0.35 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1257.00 0.24 1.66 76.46 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 228.00 15.15 0.30 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 345.00 3.15 0.46 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA thyroid gland (Tissue)