ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 110831.00 86.64 146.19 100.0 ZFAS1-242 lncRNA thyroid gland (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 11217.00 8.77 14.80 100.0 ZFAS1-242 lncRNA thyroid gland (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1599.00 30.10 2.11 100.0 ENST00000837997 lncRNA thyroid gland (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 1513.00 28.48 2.00 100.0 ENST00000837997 lncRNA thyroid gland (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 7083.00 71.90 9.34 79.33 ENST00000839036 lncRNA thyroid gland (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 104.00 13.02 0.14 100.0 ENST00000849527 lncRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 117936.00 66.49 155.57 84.8 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 143.00 0.08 0.19 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 961.00 0.18 1.27 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 7508.00 61.41 9.90 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 463.00 3.79 0.61 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 390.00 12.21 0.51 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 45.00 0.45 0.06 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 1762.00 35.76 2.32 81.12 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 324.00 0.06 0.43 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 41.00 13.85 0.05 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 439.00 3.04 0.58 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1361.00 9.44 1.80 95.04 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 261.00 1.81 0.34 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2993.00 24.65 3.95 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 10030.00 1.91 13.23 93.67 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 364.00 0.07 0.48 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 7315.00 1.39 9.65 80.54 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 85311.00 16.24 112.53 50.44 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 11.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA thyroid gland (Tissue)