ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 273613.40 40.07 360.91 52.24 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 249.00 0.04 0.33 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 802.00 0.12 1.06 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 271186.17 39.71 357.71 49.19 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 40887.00 5.99 53.93 92.83 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 194.00 0.03 0.26 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 6870.00 1.01 9.06 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 148.00 0.02 0.20 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 5.00 0.00 0.01 83.33 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 31958.00 4.68 42.15 96.94 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 1780.00 10.53 2.35 71.4 SNHG14-323 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 5648247.00 95.29 7450.42 99.54 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 25965.00 0.44 34.25 61.75 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 19841.00 0.33 26.17 49.46 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 80819.00 1.36 106.61 93.32 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 13044.00 0.22 17.21 100.0 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 17679.00 54.60 23.32 87.05 SNHG14-336 lncRNA thyroid gland (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 12094.00 37.35 15.95 65.45 SNHG14-336 lncRNA thyroid gland (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 13358.00 63.17 17.62 94.13 SNHG14-341 lncRNA thyroid gland (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 2387.00 26.97 3.15 100.0 NCL-211 retained intron thyroid gland (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 965.00 22.81 1.27 100.0 FMN2-209 protein coding CDS not defined thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 27.00 0.05 0.04 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 262.00 0.51 0.35 12.94 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 12404.00 24.32 16.36 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 9104.00 17.85 12.01 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)