ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 4464.00 0.13 5.89 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 2305.00 0.07 3.04 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 843.00 0.02 1.11 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 1752.00 0.05 2.31 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 45956.00 1.33 60.62 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 928.00 0.03 1.22 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 4118.00 0.12 5.43 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 163304.00 4.73 215.41 56.72 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 2665.00 0.08 3.52 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 791222.00 22.92 1043.68 98.19 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 3623.00 0.10 4.78 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1222.00 0.04 1.61 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 10.00 0.00 0.01 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 299482.00 8.68 395.04 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 5918.00 0.17 7.81 80.16 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 2141.36 0.06 2.82 57.09 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 944.00 0.03 1.25 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 5772.00 0.17 7.61 66.67 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 3035.00 0.09 4.00 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 5014.00 0.15 6.61 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 813.00 0.02 1.07 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 106044.00 34.30 139.88 100.0 SNHG14-315 lncRNA thyroid gland (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 81433.00 26.34 107.42 90.62 SNHG14-315 lncRNA thyroid gland (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 75747.00 24.50 99.92 86.84 SNHG14-315 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 3178.00 0.47 4.19 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)