ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 83.00 0.53 0.11 100.0 SNHG14-303 lncRNA thyroid gland (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 38.00 1.38 0.05 100.0 SNHG14-306 lncRNA thyroid gland (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 65.00 2.36 0.09 100.0 SNHG14-306 lncRNA thyroid gland (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 1745.00 63.48 2.30 97.7 SNHG14-306 lncRNA thyroid gland (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 89.00 3.24 0.12 100.0 SNHG14-306 lncRNA thyroid gland (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 644.00 2.44 0.85 100.0 ENST00000666735 lncRNA thyroid gland (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 8813.00 33.32 11.62 100.0 ENST00000666735 lncRNA thyroid gland (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 148680.00 87.39 196.12 100.0 MEG8-242 lncRNA thyroid gland (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 8776.53 26.24 11.58 36.66 SNHG14-312 lncRNA thyroid gland (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 15829.02 47.33 20.88 66.13 SNHG14-312 lncRNA thyroid gland (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 1113.00 3.33 1.47 100.0 SNHG14-312 lncRNA thyroid gland (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 6914.00 0.31 9.12 100.0 MEG8-244 lncRNA thyroid gland (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 7631.00 0.35 10.07 100.0 MEG8-244 lncRNA thyroid gland (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 2155627.00 97.88 2843.42 99.92 MEG8-244 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 9180.00 0.27 12.11 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 15391.00 0.45 20.30 98.75 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 1503.87 0.04 1.98 40.09 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 5154.00 0.15 6.80 80.01 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1395627.00 40.44 1840.93 98.91 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 3251.00 0.09 4.29 73.54 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 198950.00 5.76 262.43 99.3 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 21350.00 0.62 28.16 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 50484.00 1.46 66.59 98.31 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 901.00 0.03 1.19 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 4046.00 0.12 5.34 100.0 SNHG1-248 lncRNA thyroid gland (Tissue)