ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 5685.00 0.55 7.50 52.55 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 1059.00 0.10 1.40 29.83 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 4039.00 0.39 5.33 83.18 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 1967.00 0.19 2.59 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1289.00 0.13 1.70 48.9 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 14003.00 1.37 18.47 68.64 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 2355.00 0.23 3.11 61.23 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 92.00 0.01 0.12 52.87 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 12710.00 1.24 16.77 85.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 65433.00 6.39 86.31 60.2 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 1007.00 0.10 1.33 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 870342.00 84.96 1148.04 99.38 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 11402.00 1.11 15.04 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 9.00 0.00 0.01 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 348.00 0.03 0.46 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 79542.00 95.46 104.92 100.0 RPS8-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 492.00 10.76 0.65 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 1317.00 28.81 1.74 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 750.00 16.41 0.99 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 1520491.00 88.02 2005.63 99.45 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 5500.00 0.32 7.25 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 5209.00 0.30 6.87 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 6295.00 0.36 8.30 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 171395.00 9.92 226.08 99.23 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1147.00 23.08 1.51 100.0 GABRE-209 retained intron thyroid gland (Tissue)