ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 2598.00 1.18 3.43 100.0 SNORD19C-201 snoRNA thyroid gland (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 206544.00 94.00 272.45 98.76 SNORD19C-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 5145.00 1.77 6.79 100.0 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 94.00 0.03 0.12 100.0 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 270091.00 93.16 356.27 98.32 SNORD12B-201 snoRNA thyroid gland (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 2609.00 35.41 3.44 100.0 Y_RNA.609-201 misc RNA thyroid gland (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 533.00 34.59 0.70 100.0 Y_RNA.612-201 misc RNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 2238.00 1.20 2.95 100.0 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 3068.00 1.64 4.05 100.0 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 175805.00 93.95 231.90 99.55 SNORD71-201 snoRNA thyroid gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 9431.00 19.15 12.44 62.98 MIR194-2HG-201 lncRNA thyroid gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 37274.00 75.70 49.17 91.74 MIR194-2HG-201 lncRNA thyroid gland (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 10.00 0.12 0.01 100.0 LINC01783-201 lncRNA thyroid gland (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 2206.00 98.18 2.91 100.0 RPS7P15-201 processed pseudogene thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1295.00 6.90 1.71 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 2480.00 13.22 3.27 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 71.00 0.38 0.09 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 1061.00 5.65 1.40 100.0 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 6638.00 35.38 8.76 93.51 SNORD62B-201 snoRNA thyroid gland (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 98.00 97.03 0.13 100.0 MRPL32-203 nonsense mediated decay thyroid gland (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1259.00 88.04 1.66 100.0 ENST00000436739 lncRNA thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 4981.00 16.02 6.57 65.27 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1780.00 5.72 2.35 100.0 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 356.00 1.14 0.47 100.0 TMEM107-204 protein coding thyroid gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 879.00 2.83 1.16 74.87 TMEM107-204 protein coding thyroid gland (Tissue)