ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1021.00 0.98 1.35 100.0 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 313.00 0.30 0.41 100.0 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 79332.00 75.82 104.64 91.63 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 25.00 53.19 0.03 100.0 MIR196A1-201 miRNA thyroid gland (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 1882.00 9.09 2.48 100.0 MT-RNR1-201 Mt rRNA thyroid gland (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 2785.00 13.45 3.67 100.0 MT-RNR1-201 Mt rRNA thyroid gland (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3959.00 84.59 5.22 100.0 MIR454-201 miRNA thyroid gland (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 678.00 35.55 0.89 100.0 MIR501-201 miRNA thyroid gland (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 5299.00 88.95 6.99 100.0 MIR769-201 miRNA thyroid gland (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 178.00 63.35 0.23 100.0 KRTAP19-1-201 protein coding thyroid gland (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1254.00 36.01 1.65 100.0 MIR708-201 miRNA thyroid gland (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 55.00 79.71 0.07 100.0 MIR509-3-201 miRNA thyroid gland (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 4437.00 68.95 5.85 100.0 MIR543-201 miRNA thyroid gland (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 251.00 92.62 0.33 100.0 MIR301B-201 miRNA thyroid gland (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 5078.00 53.91 6.70 72.52 RNU1-82P-201 snRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 119.00 0.22 0.16 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 19343.00 35.63 25.51 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 8997.00 16.57 11.87 83.51 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 4271.00 7.87 5.63 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 972.00 71.84 1.28 100.0 U3.17-201 snoRNA thyroid gland (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 16315.00 83.58 21.52 100.0 SNORD17-201 snoRNA thyroid gland (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 570.00 65.07 0.75 100.0 SNORD72-201 snoRNA thyroid gland (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 23515.00 82.43 31.02 100.0 SNORD70B-201 snoRNA thyroid gland (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 7874.00 56.68 10.39 92.47 RNY4P18-201 misc RNA thyroid gland (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 8660.00 4.90 11.42 51.06 SNORD90-201 snoRNA thyroid gland (Tissue)