ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 42489.00 67.86 56.05 80.3 MIR130A-201 miRNA thyroid gland (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 19288.00 30.80 25.44 52.89 MIR130A-201 miRNA thyroid gland (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 1127709.00 97.82 1487.53 99.17 MIRLET7F2-201 miRNA thyroid gland (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 1398.00 71.11 1.84 100.0 MIR652-201 miRNA thyroid gland (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 81.00 29.56 0.11 100.0 MIR653-201 miRNA thyroid gland (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 8592.00 69.80 11.33 100.0 MIR140-201 miRNA thyroid gland (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 1302.00 17.54 1.72 100.0 MIR106B-201 miRNA thyroid gland (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1962.00 26.43 2.59 74.63 MIR106B-201 miRNA thyroid gland (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 36870.00 25.44 48.63 95.07 SNORD83A-201 snoRNA thyroid gland (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 100385.00 69.26 132.41 98.44 SNORD83A-201 snoRNA thyroid gland (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 4603.00 85.45 6.07 100.0 SNORD41-201 snoRNA thyroid gland (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 19.00 0.25 0.03 100.0 MT-TF-201 Mt tRNA thyroid gland (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 85.00 1.10 0.11 58.22 MT-TF-201 Mt tRNA thyroid gland (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 837.00 10.83 1.10 56.59 MT-TF-201 Mt tRNA thyroid gland (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 2335.00 10.59 3.08 100.0 MT-TV-201 Mt tRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 6269.00 7.53 8.27 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 7860.00 9.44 10.37 87.53 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 4352.00 5.23 5.74 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 3637.00 4.37 4.80 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 6815.00 8.18 8.99 82.14 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 371.00 0.45 0.49 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 38.00 0.05 0.05 100.0 MT-RNR2-201 Mt rRNA thyroid gland (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 1983.00 36.67 2.62 91.76 MT-TI-201 Mt tRNA thyroid gland (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 643.00 11.89 0.85 100.0 MT-TI-201 Mt tRNA thyroid gland (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2369.17 10.66 3.13 65.77 MT-TQ-201 Mt tRNA thyroid gland (Tissue)