ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1256.00 0.90 2.60 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 11.00 12.22 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 61.00 0.08 0.13 95.31 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 130.00 22.34 0.27 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 48.00 8.25 0.10 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 152.00 28.04 0.32 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 19.00 0.82 0.04 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 372.00 0.50 0.77 20.06 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 3.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 116.00 12.71 0.24 80.56 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 67.00 7.34 0.14 36.61 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 330.00 13.28 0.68 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 971.00 0.70 2.01 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 87995.00 63.88 182.46 94.04 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 31.00 7.09 0.06 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 57.00 3.11 0.12 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 20.00 0.19 0.04 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 260.00 3.13 0.54 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 123.00 1.48 0.26 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 120.00 1.44 0.25 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 58.00 0.70 0.12 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 487.00 5.86 1.01 99.39 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 155.00 1.86 0.32 69.2 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 287.00 10.29 0.60 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 430.00 15.41 0.89 43.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA diencephalon (Tissue)