ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 638111.00 95.87 1323.13 96.81 MIR100-201 miRNA diencephalon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 518.00 86.77 1.07 100.0 MIR301A-201 miRNA diencephalon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 2561.00 10.77 5.31 20.73 MIR130A-201 miRNA diencephalon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 21049.00 88.50 43.65 95.51 MIR130A-201 miRNA diencephalon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 491872.00 98.73 1019.90 99.39 MIRLET7F2-201 miRNA diencephalon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 715.00 68.16 1.48 100.0 MIR652-201 miRNA diencephalon (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 808.00 87.54 1.68 100.0 MIR653-201 miRNA diencephalon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1860.00 64.88 3.86 100.0 MIR140-201 miRNA diencephalon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1040.00 28.44 2.16 70.46 MIR106B-201 miRNA diencephalon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 410.00 11.21 0.85 100.0 MIR106B-201 miRNA diencephalon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 29336.00 29.42 60.83 95.31 SNORD83A-201 snoRNA diencephalon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 67382.00 67.58 139.72 98.33 SNORD83A-201 snoRNA diencephalon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 550.00 70.51 1.14 100.0 SNORD41-201 snoRNA diencephalon (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 17.00 0.29 0.04 51.52 MT-TF-201 Mt tRNA diencephalon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 361.00 6.08 0.75 64.12 MT-TF-201 Mt tRNA diencephalon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 26.00 0.44 0.05 100.0 MT-TF-201 Mt tRNA diencephalon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1825.00 11.80 3.78 100.0 MT-TV-201 Mt tRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 3296.00 4.35 6.83 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 9329.00 12.30 19.34 92.3 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 77.00 0.10 0.16 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 107.00 0.14 0.22 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 8880.00 11.71 18.41 81.99 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1330.00 1.75 2.76 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 19.00 0.03 0.04 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 3289.00 30.41 6.82 100.0 MT-TI-201 Mt tRNA diencephalon (Tissue)