ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 1631.00 73.97 3.38 100.0 MIR15B-201 miRNA diencephalon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 863.00 87.61 1.79 100.0 MIR150-201 miRNA diencephalon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 97.00 48.50 0.20 100.0 MIR542-201 miRNA diencephalon (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 144.00 2.89 0.30 100.0 MIR500A-201 miRNA diencephalon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 3598.00 72.18 7.46 100.0 MIR500A-201 miRNA diencephalon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 6100.00 32.20 12.65 88.64 MIR30A-201 miRNA diencephalon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 6054.00 31.95 12.55 88.56 MIR30A-201 miRNA diencephalon (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 5459.00 28.81 11.32 100.0 MIR30A-201 miRNA diencephalon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 46.00 0.24 0.10 100.0 MIR30A-201 miRNA diencephalon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 140278.00 92.77 290.87 94.89 MIR27B-201 miRNA diencephalon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 737.00 0.49 1.53 100.0 MIR27B-201 miRNA diencephalon (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 6.00 100.00 0.01 100.0 MIR196A2-201 miRNA diencephalon (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 187.00 55.49 0.39 100.0 MIR577-201 miRNA diencephalon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 20318.00 82.76 42.13 88.5 MIR654-201 miRNA diencephalon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 161917.00 92.58 335.74 93.87 MIR204-201 miRNA diencephalon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1414.00 91.70 2.93 100.0 MIR152-201 miRNA diencephalon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 1900.00 44.71 3.94 100.0 MIR138-1-201 miRNA diencephalon (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 16171.00 95.08 33.53 100.0 MIR30C1-201 miRNA diencephalon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 1317.00 85.63 2.73 100.0 MIR660-201 miRNA diencephalon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 10738.00 1.53 22.27 100.0 MIR125B1-201 miRNA diencephalon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 532688.00 75.74 1104.53 93.97 MIR125B1-201 miRNA diencephalon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 121.00 32.70 0.25 100.0 MIR493-201 miRNA diencephalon (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 204.00 55.14 0.42 100.0 MIR493-201 miRNA diencephalon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 2393.49 24.26 4.96 27.62 MIR182-201 miRNA diencephalon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 7225.05 73.25 14.98 78.8 MIR182-201 miRNA diencephalon (Tissue)