ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 40432.00 81.41 83.84 96.29 MIR181C-201 miRNA diencephalon (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 5110.00 10.29 10.60 100.0 MIR181C-201 miRNA diencephalon (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 417.00 87.97 0.86 100.0 MIR194-1-201 miRNA diencephalon (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 205766.00 87.47 426.66 89.0 MIR128-2-201 miRNA diencephalon (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 65563.00 85.80 135.95 95.96 MIR99A-201 miRNA diencephalon (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 2480.00 8.92 5.14 74.79 MIR28-201 miRNA diencephalon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 127.00 0.46 0.26 100.0 MIR28-201 miRNA diencephalon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 22540.00 81.03 46.74 93.68 MIR28-201 miRNA diencephalon (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 356.00 60.03 0.74 100.0 MIR183-201 miRNA diencephalon (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 1322.00 74.48 2.74 100.0 MIR145-201 miRNA diencephalon (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 176.00 9.92 0.36 100.0 MIR145-201 miRNA diencephalon (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 26914.00 96.20 55.81 97.42 MIR186-201 miRNA diencephalon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 115.00 92.74 0.24 100.0 MIR200B-201 miRNA diencephalon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 2489.00 62.62 5.16 100.0 MIR218-1-201 miRNA diencephalon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 72004.00 89.07 149.30 93.89 MIR181B2-201 miRNA diencephalon (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 302.00 64.67 0.63 100.0 MIR495-201 miRNA diencephalon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 8669.00 90.57 17.98 91.13 MIR10B-201 miRNA diencephalon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 2991.99 22.42 6.20 56.13 MIR130B-201 miRNA diencephalon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 3088.07 23.14 6.40 52.15 MIR130B-201 miRNA diencephalon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 6607.00 49.51 13.70 100.0 MIR130B-201 miRNA diencephalon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 254.00 5.13 0.53 100.0 MIR199A1-201 miRNA diencephalon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 7581.00 84.22 15.72 100.0 MIR487B-201 miRNA diencephalon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 14597.46 66.25 30.27 70.86 MIR93-201 miRNA diencephalon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 5736.99 26.04 11.90 39.61 MIR93-201 miRNA diencephalon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 3105.00 85.66 6.44 96.46 MIR532-201 miRNA diencephalon (Tissue)