ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2172.00 0.63 4.83 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 81736.80 23.70 181.68 31.74 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 569.00 0.17 1.26 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 1015.00 0.29 2.26 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 197629.59 57.31 439.29 70.92 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 26604.00 7.72 59.14 88.3 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 591.00 0.17 1.31 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2484.00 0.72 5.52 100.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 4.00 0.00 0.01 80.0 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 3280.00 0.95 7.29 99.76 SNHG5-273 lncRNA thyroid gland (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 1890.00 23.19 4.20 68.11 SNHG14-323 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 2335.00 0.59 5.19 70.35 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 375811.00 94.90 835.35 99.64 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1261.00 0.32 2.80 39.49 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 6783.00 1.71 15.08 95.41 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 1044.00 0.26 2.32 100.0 MEG8-251 lncRNA thyroid gland (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 13925.00 60.14 30.95 88.55 SNHG14-336 lncRNA thyroid gland (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 8021.00 34.64 17.83 58.41 SNHG14-336 lncRNA thyroid gland (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 5857.00 61.57 13.02 92.09 SNHG14-341 lncRNA thyroid gland (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 920.00 13.05 2.04 100.0 NCL-211 retained intron thyroid gland (Tissue)
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 1.00 0.14 0.00 100.0 NCL-216 retained intron thyroid gland (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 2372.00 14.83 5.27 100.0 FMN2-209 protein coding CDS not defined thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 22.00 0.20 0.05 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 15.00 0.14 0.03 15.96 LINC02739-203 lncRNA thyroid gland (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 7211.00 65.97 16.03 100.0 LINC02739-203 lncRNA thyroid gland (Tissue)