ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 1049.00 0.06 2.33 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 11130.00 0.62 24.74 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 31460.00 1.75 69.93 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.00 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 284.00 0.02 0.63 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1444.00 26.93 3.21 100.0 FTX-219 lncRNA thyroid gland (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 1486.00 27.71 3.30 82.69 FTX-219 lncRNA thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 293.00 4.96 0.65 30.91 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 16.00 0.27 0.04 29.09 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 1506.00 25.48 3.35 69.31 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 655.00 11.08 1.46 69.09 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1217.00 20.59 2.71 80.33 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 48.00 0.81 0.11 100.0 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 608.00 10.29 1.35 100.0 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 142.00 2.40 0.32 100.0 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 5434.00 3.12 12.08 74.78 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1357.00 0.78 3.02 98.83 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 2183.00 1.25 4.85 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 11150.00 6.41 24.78 54.22 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 2690.00 1.55 5.98 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 2930.00 1.68 6.51 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1516.00 0.87 3.37 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 1720.00 0.99 3.82 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 4128.00 2.37 9.18 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 30239.00 17.37 67.22 57.3 ENST00000651540 lncRNA thyroid gland (Tissue)