ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 3284.45 29.37 7.30 78.65 5S_rRNA.20-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 323.00 1.92 0.72 100.0 HSPA9-211 retained intron thyroid gland (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 2252.00 13.41 5.01 30.16 HSPA9-211 retained intron thyroid gland (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 106587.00 90.68 236.92 100.0 DNM3OS-205 lncRNA thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1615.00 0.09 3.59 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 354.00 0.02 0.79 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 3526.00 0.20 7.84 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 6336.00 0.35 14.08 69.6 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 20512.00 1.14 45.59 95.56 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 30.00 0.00 0.07 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 576.00 0.03 1.28 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 603.00 0.03 1.34 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1237116.00 69.00 2749.85 99.81 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2412.00 0.13 5.36 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 5268.00 0.29 11.71 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1309.00 0.07 2.91 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1980.00 0.11 4.40 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1006.00 0.06 2.24 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 383.00 0.02 0.85 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 623.00 0.03 1.38 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 36306.00 2.02 80.70 88.28 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 10605.00 0.59 23.57 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 52391.00 2.92 116.45 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 87312.00 4.87 194.08 97.29 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 207738.00 11.59 461.76 100.0 GAS5-230 retained intron thyroid gland (Tissue)