ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 4138.00 3.29 9.20 100.0 U2.6-201 snRNA thyroid gland (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 1118.00 0.71 2.49 38.78 ENST00000619323 lncRNA thyroid gland (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 150399.00 96.06 334.31 98.19 ENST00000619323 lncRNA thyroid gland (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 193.00 9.10 0.43 100.0 SCARNA4-202 scaRNA thyroid gland (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 5356.00 78.99 11.91 100.0 ENST00000625572 miRNA thyroid gland (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 80971.00 94.26 179.98 100.0 ENST00000628177 snoRNA thyroid gland (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 851.00 90.24 1.89 100.0 ENST00000630615 snoRNA thyroid gland (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 11.00 2.54 0.02 100.0 DMRT2-209 protein coding thyroid gland (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 229.00 52.89 0.51 100.0 DMRT2-209 protein coding thyroid gland (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 882.00 15.27 1.96 100.0 SNORD98-201 snoRNA thyroid gland (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 3707.00 64.18 8.24 100.0 SNORD98-201 snoRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 76527.81 41.99 170.11 47.0 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 333.22 0.18 0.74 13.48 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 259.00 0.14 0.58 100.0 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 1940.84 1.07 4.31 78.51 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 587.00 7.35 1.30 100.0 MEG8-222 lncRNA thyroid gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 3945.00 49.38 8.77 100.0 MEG8-222 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 7175.00 11.38 15.95 95.07 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 24387.00 38.66 54.21 85.87 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 5440.00 8.62 12.09 100.0 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 5571.00 8.83 12.38 85.87 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 138.00 0.22 0.31 100.0 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 2179.00 3.45 4.84 45.44 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1018.00 1.61 2.26 60.06 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 1470.00 2.33 3.27 70.84 SNHG14-224 lncRNA thyroid gland (Tissue)