ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 143.00 0.34 0.32 100.0 POLG-DT-202 lncRNA thyroid gland (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 3080.00 44.30 6.85 100.0 ENST00000570843 lncRNA thyroid gland (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 23850.00 82.93 53.01 100.0 MIR497HG-207 lncRNA thyroid gland (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 628220.00 99.33 1396.40 99.61 MIR22HG-212 lncRNA thyroid gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 159.00 0.14 0.35 21.78 SNORD53B-201 snoRNA thyroid gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 107735.00 93.03 239.47 95.64 SNORD53B-201 snoRNA thyroid gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 571.00 0.49 1.27 78.22 SNORD53B-201 snoRNA thyroid gland (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 1710.00 90.14 3.80 100.0 ENST00000578036 lncRNA thyroid gland (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 4797.00 88.07 10.66 100.0 RPL23A-207 protein coding thyroid gland (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 321.00 73.12 0.71 100.0 MIR744-201 miRNA thyroid gland (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 1306.00 66.80 2.90 100.0 MIR378C-201 miRNA thyroid gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 1361.00 0.97 3.03 5.46 MIR142HG-201 lncRNA thyroid gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 207.00 0.15 0.46 100.0 MIR142HG-201 lncRNA thyroid gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 115808.00 82.94 257.42 89.45 MIR142HG-201 lncRNA thyroid gland (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 148.00 0.75 0.33 100.0 SNORD3C-201 snoRNA thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 445.61 0.08 0.99 70.51 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 158.85 0.03 0.35 42.47 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 405210.00 75.52 900.70 88.16 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 122561.00 22.84 272.43 90.95 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 508.00 2.94 1.13 100.0 MIR133A1HG-202 lncRNA thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 179.00 0.14 0.40 100.0 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 3899.00 2.99 8.67 28.12 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 7918.00 6.08 17.60 43.06 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 54416.00 41.76 120.96 96.47 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 58467.00 44.87 129.96 98.17 RPL17-211 retained intron thyroid gland (Tissue)