ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1284.00 10.65 2.85 100.0 ENST00000554988 lncRNA thyroid gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1805.00 14.97 4.01 100.0 ENST00000554988 lncRNA thyroid gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 61.00 0.51 0.14 100.0 ENST00000554988 lncRNA thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 567.00 0.68 1.26 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 815.00 0.97 1.81 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 37943.00 45.18 84.34 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 40992.00 48.81 91.12 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 1155.00 98.80 2.57 100.0 TEKT4P2-201 transcribed unprocessed pseudogene thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 355.00 0.15 0.79 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 43.00 0.02 0.10 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1806.00 0.74 4.01 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 710.00 0.29 1.58 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 225545.00 92.38 501.34 98.76 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 5809.00 67.09 12.91 100.0 RPL4-207 retained intron thyroid gland (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 91.00 1.05 0.20 100.0 RPL4-207 retained intron thyroid gland (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 42387.00 86.76 94.22 95.08 ENST00000565336 lncRNA thyroid gland (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 851.00 1.74 1.89 66.9 ENST00000565336 lncRNA thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 402627.00 83.08 894.96 86.65 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1935.00 0.40 4.30 100.0 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 808.00 0.17 1.80 100.0 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1840.00 0.38 4.09 100.0 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 7261.00 64.13 16.14 100.0 RPL4-214 retained intron thyroid gland (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 488.00 4.31 1.08 100.0 RPL4-214 retained intron thyroid gland (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 11466.66 27.06 25.49 34.82 POLG-DT-202 lncRNA thyroid gland (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 19687.12 46.46 43.76 57.63 POLG-DT-202 lncRNA thyroid gland (Tissue)