ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 19158.00 5.39 42.58 97.66 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 400.00 0.11 0.89 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2816.00 0.79 6.26 35.36 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 19934.00 81.55 44.31 89.08 MIR3142HG-201 lncRNA thyroid gland (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 8439.00 83.70 18.76 100.0 SNHG6-204 retained intron thyroid gland (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 32748.00 39.40 72.79 100.0 MIR151A-201 miRNA thyroid gland (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 41875.00 50.38 93.08 87.34 MIR151A-201 miRNA thyroid gland (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 5220.00 97.35 11.60 100.0 DENND3-221 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 62.00 0.05 0.14 68.13 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 3611.00 2.76 8.03 65.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 10.00 0.01 0.02 100.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 29.00 0.02 0.06 31.87 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 257.00 0.20 0.57 70.6 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 920.00 0.70 2.04 100.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 1713.00 1.31 3.81 100.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 106.00 0.08 0.24 100.0 WDR74-204 protein coding thyroid gland (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 39481.00 86.89 87.76 100.0 HSPA8-211 retained intron thyroid gland (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 503.00 11.42 1.12 100.0 SCARNA9-201 lncRNA thyroid gland (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 34920.00 83.65 77.62 100.0 TAF1D-215 retained intron thyroid gland (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 740.00 1.77 1.64 100.0 TAF1D-215 retained intron thyroid gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 3746.00 20.92 8.33 100.0 HSPA8-215 retained intron thyroid gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 10477.00 58.52 23.29 100.0 HSPA8-215 retained intron thyroid gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 35.00 0.20 0.08 100.0 HSPA8-215 retained intron thyroid gland (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 1123.00 26.89 2.50 100.0 RPS2-215 retained intron thyroid gland (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 283990.00 88.22 631.25 89.27 ENST00000548801 lncRNA thyroid gland (Tissue)