ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 18393.00 70.23 40.88 100.0 GNL3-211 retained intron thyroid gland (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 4083.00 15.59 9.08 100.0 GNL3-211 retained intron thyroid gland (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 9.00 0.03 0.02 100.0 RPL5-205 retained intron thyroid gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 1191.00 4.35 2.65 100.0 RPL5-205 retained intron thyroid gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 21668.00 79.13 48.16 100.0 RPL5-205 retained intron thyroid gland (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 5.00 0.30 0.01 100.0 ZBED9-AS1-201 lncRNA thyroid gland (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 38640.00 90.28 85.89 100.0 RPS3A-206 retained intron thyroid gland (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 15299.00 93.92 34.01 100.0 COX7C-203 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1541.00 0.33 3.43 100.0 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 13106.00 2.82 29.13 91.04 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 69575.09 14.97 154.65 21.61 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 361111.14 77.68 802.68 84.35 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 80046.00 76.23 177.93 96.35 RACK1-230 retained intron thyroid gland (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 22437.00 21.37 49.87 71.24 RACK1-230 retained intron thyroid gland (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 16.00 11.11 0.04 100.0 RNA5SP486-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1386.00 68.44 3.08 100.0 SCARNA5-201 scaRNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 170477.00 47.94 378.94 91.85 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 19158.00 5.39 42.58 97.66 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 400.00 0.11 0.89 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2816.00 0.79 6.26 35.36 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 13277.00 3.73 29.51 74.37 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1608.00 0.45 3.57 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 54363.00 15.29 120.84 78.23 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 603.00 0.17 1.34 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 493.00 0.14 1.10 46.64 RNY4-201 misc RNA thyroid gland (Tissue)