ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 668464.00 96.12 1485.86 99.55 RPL13-207 retained intron thyroid gland (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 7693.00 1.11 17.10 100.0 RPL13-207 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 2744.00 0.37 6.10 81.04 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 449.00 0.06 1.00 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 4769.00 0.64 10.60 45.94 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 2660.00 0.36 5.91 63.73 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 102.00 0.01 0.23 53.68 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 1337.00 0.18 2.97 40.77 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 10162.00 1.36 22.59 83.3 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 71660.00 9.60 159.29 55.29 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 291.00 0.04 0.65 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 610835.00 81.80 1357.76 98.96 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 2329.00 0.31 5.18 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 884.00 0.12 1.96 40.38 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 12.00 0.00 0.03 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 10098.00 1.35 22.45 62.05 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 230.00 0.03 0.51 100.0 EIF4A2-219 retained intron thyroid gland (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 96679.00 96.53 214.90 100.0 RPS8-207 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 534.00 18.66 1.19 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 289.00 10.10 0.64 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 720.00 25.17 1.60 100.0 RPL7A-206 protein coding CDS not defined thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 2965.00 0.33 6.59 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2310.00 0.26 5.13 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 796.00 0.09 1.77 100.0 RPL21-209 retained intron thyroid gland (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 74212.00 8.26 164.96 98.73 RPL21-209 retained intron thyroid gland (Tissue)