ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 7737.00 49.08 17.20 94.56 RNY4P18-201 misc RNA thyroid gland (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 110993.00 94.84 246.71 100.0 SNORD90-201 snoRNA thyroid gland (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 1575.00 1.35 3.50 18.73 SNORD90-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 3013.00 0.95 6.70 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 3652.00 1.15 8.12 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3272.00 1.03 7.27 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 294103.00 92.86 653.73 100.0 SNORD69-201 snoRNA thyroid gland (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 6217.00 61.37 13.82 79.97 SNORD70-201 snoRNA thyroid gland (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 2284.00 67.61 5.08 83.79 B4GALNT2-202 protein coding thyroid gland (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 46.00 1.36 0.10 100.0 B4GALNT2-202 protein coding thyroid gland (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1408.00 90.08 3.13 100.0 NDE1-202 protein coding thyroid gland (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 69.00 85.19 0.15 100.0 MIR208B-201 miRNA thyroid gland (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 2277.00 68.54 5.06 100.0 MIR450B-201 miRNA thyroid gland (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 310.00 49.68 0.69 100.0 MIR887-201 miRNA thyroid gland (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 2178.00 86.57 4.84 100.0 MIR889-201 miRNA thyroid gland (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 4582.00 75.92 10.18 100.0 SNORD111-201 snoRNA thyroid gland (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 5630.00 69.92 12.51 85.41 SNORD88A-201 snoRNA thyroid gland (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 382.00 93.86 0.85 100.0 MIR548K-201 miRNA thyroid gland (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 302.00 62.01 0.67 100.0 MIR320B2-201 miRNA thyroid gland (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 41.00 95.35 0.09 100.0 MIR1271-201 miRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 416.00 0.06 0.92 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 660200.00 97.41 1467.49 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2489.00 0.37 5.53 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 673.00 0.10 1.50 100.0 SNORD100-201 snoRNA thyroid gland (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2970.00 62.30 6.60 100.0 SNORD111B-201 snoRNA thyroid gland (Tissue)