ENCFF001RMR

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 731.00 0.12 1.62 30.26 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 1577.00 0.27 3.51 100.0 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 369321.00 62.89 820.92 86.8 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 1685.00 0.29 3.75 77.83 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 8833.00 1.50 19.63 100.0 MT-TE-201 Mt tRNA thyroid gland (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 227.00 57.91 0.50 100.0 MIR196A1-201 miRNA thyroid gland (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 2997.00 9.73 6.66 100.0 MT-RNR1-201 Mt rRNA thyroid gland (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1048.00 3.40 2.33 100.0 MT-RNR1-201 Mt rRNA thyroid gland (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 4245.00 88.66 9.44 100.0 MIR454-201 miRNA thyroid gland (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 33.00 13.81 0.07 100.0 MIR501-201 miRNA thyroid gland (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 2618.00 92.35 5.82 100.0 MIR769-201 miRNA thyroid gland (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 33.00 44.59 0.07 100.0 KRTAP19-1-201 protein coding thyroid gland (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 832.00 49.97 1.85 100.0 MIR708-201 miRNA thyroid gland (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 600.00 84.27 1.33 100.0 MIR509-3-201 miRNA thyroid gland (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 66.00 48.89 0.15 100.0 MIR543-201 miRNA thyroid gland (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 12.00 85.71 0.03 100.0 MIR301B-201 miRNA thyroid gland (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 4488.00 55.46 9.98 71.92 RNU1-82P-201 snRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 1382.00 5.46 3.07 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 9679.00 38.21 21.51 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 56.00 0.22 0.12 100.0 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4546.00 17.95 10.10 79.71 SNORD66-201 snoRNA thyroid gland (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 167.00 67.89 0.37 100.0 U3.17-201 snoRNA thyroid gland (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 10032.00 61.65 22.30 100.0 SNORD17-201 snoRNA thyroid gland (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 35.00 48.61 0.08 100.0 SNORD72-201 snoRNA thyroid gland (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 8831.00 80.27 19.63 100.0 SNORD70B-201 snoRNA thyroid gland (Tissue)