ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 4660.00 0.11 7.02 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 3011.00 0.07 4.53 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 3578.00 0.08 5.39 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 462.00 0.01 0.70 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 1451.00 0.03 2.18 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 66666.00 1.58 100.36 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 465.00 0.01 0.70 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 4366.00 0.10 6.57 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 101325.00 2.40 152.54 64.72 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 4005.00 0.09 6.03 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 404468.00 9.58 608.91 96.96 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 4720.00 0.11 7.11 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 2158.00 0.05 3.25 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 7.00 0.00 0.01 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 296449.00 7.02 446.29 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1856.00 0.04 2.79 79.93 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1260.53 0.03 1.90 55.9 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 566.00 0.01 0.85 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2412.00 0.06 3.63 61.45 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1722.00 0.04 2.59 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 1588.00 0.04 2.39 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 982.00 0.02 1.48 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 320661.00 39.50 482.75 100.0 SNHG14-315 lncRNA lung (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 152003.00 18.72 228.84 91.28 SNHG14-315 lncRNA lung (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 244551.00 30.12 368.16 87.37 SNHG14-315 lncRNA lung (Tissue)