ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 14387.00 1.09 21.66 92.5 C19orf48P-203 retained intron lung (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 122.00 0.01 0.18 100.0 C19orf48P-203 retained intron lung (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 27.00 0.00 0.04 100.0 C19orf48P-203 retained intron lung (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 4.00 57.14 0.01 100.0 ENST00000597420 lncRNA lung (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 471.00 6.90 0.71 100.0 RPS11-206 retained intron lung (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 5179.00 75.83 7.80 100.0 RPS11-206 retained intron lung (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 562658.00 64.90 847.06 66.9 CARMN-209 lncRNA lung (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 2606.00 31.98 3.92 100.0 ENST00000602478 lncRNA lung (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 13.00 8.44 0.02 100.0 PPFIA1P1-201 processed pseudogene lung (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 1359.00 39.63 2.05 100.0 SNORD114-21-201 snoRNA lung (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1320.00 38.50 1.99 100.0 SNORD114-21-201 snoRNA lung (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 2136.00 46.10 3.22 100.0 SNORD115-40-201 snoRNA lung (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 13968.00 97.98 21.03 100.0 MIR98-201 miRNA lung (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 12494.00 96.46 18.81 100.0 SNORD113-5-201 snoRNA lung (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 6389.00 93.08 9.62 100.0 MIR15A-201 miRNA lung (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 330.00 76.92 0.50 100.0 MIR376C-201 miRNA lung (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 910.00 48.92 1.37 100.0 SNHG21-206 retained intron lung (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 203.00 18.71 0.31 100.0 SNORD11B-201 snoRNA lung (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 3373.00 60.70 5.08 100.0 SNORD91B-201 snoRNA lung (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 20426.00 57.69 30.75 71.33 SNORD91A-201 snoRNA lung (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 75526.00 47.12 113.70 96.58 MIR486-1-201 miRNA lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 36186.00 29.94 54.48 74.15 NOP56-219 retained intron lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1655.00 1.37 2.49 100.0 NOP56-219 retained intron lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1354.00 1.12 2.04 100.0 NOP56-219 retained intron lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 47847.00 39.58 72.03 76.56 NOP56-219 retained intron lung (Tissue)