ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 746196.00 96.22 1123.37 97.08 MIR100-201 miRNA lung (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 375.00 86.41 0.56 100.0 MIR301A-201 miRNA lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 19640.00 18.09 29.57 31.54 MIR130A-201 miRNA lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 88005.00 81.05 132.49 93.01 MIR130A-201 miRNA lung (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 496053.00 98.29 746.79 99.12 MIRLET7F2-201 miRNA lung (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 489.00 55.51 0.74 100.0 MIR652-201 miRNA lung (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 42.00 85.71 0.06 100.0 MIR653-201 miRNA lung (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 5841.00 69.31 8.79 100.0 MIR140-201 miRNA lung (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1827.00 30.00 2.75 69.63 MIR106B-201 miRNA lung (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 1005.00 16.50 1.51 100.0 MIR106B-201 miRNA lung (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 50674.00 20.08 76.29 93.6 SNORD83A-201 snoRNA lung (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 195882.00 77.64 294.89 98.74 SNORD83A-201 snoRNA lung (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 3261.00 83.44 4.91 100.0 SNORD41-201 snoRNA lung (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 1.00 0.10 0.00 20.0 MT-TF-201 Mt tRNA lung (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 47.00 4.52 0.07 73.44 MT-TF-201 Mt tRNA lung (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 3.00 0.29 0.00 100.0 MT-TF-201 Mt tRNA lung (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 874.00 21.17 1.32 100.0 MT-TV-201 Mt tRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 1409.00 5.58 2.12 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 4304.00 17.03 6.48 91.26 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 216.00 0.85 0.33 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 172.00 0.68 0.26 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3450.00 13.65 5.19 81.77 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 408.00 1.61 0.61 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 9.00 0.04 0.01 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 375.00 13.38 0.56 100.0 MT-TI-201 Mt tRNA lung (Tissue)