ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 126.00 8.37 0.20 100.0 SNORD113-3-201 snoRNA frontal cortex (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 11780.00 70.96 18.80 100.0 SNORD52-201 snoRNA frontal cortex (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 4426.00 38.12 7.06 61.43 SNORD117-201 snoRNA frontal cortex (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 2779.00 23.93 4.43 47.13 SNORD117-201 snoRNA frontal cortex (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 1020.00 3.59 1.63 100.0 SNORD114-3-201 snoRNA frontal cortex (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 970.00 3.42 1.55 100.0 SNORD114-3-201 snoRNA frontal cortex (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 24570.00 86.53 39.21 96.95 SNORD114-3-201 snoRNA frontal cortex (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 14.00 1.26 0.02 100.0 RNA5SP298-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 39139.00 49.28 62.46 100.0 SNORD115-38-201 snoRNA frontal cortex (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 58477.00 51.21 93.32 100.0 SNORD115-10-201 snoRNA frontal cortex (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 8768.00 82.23 13.99 100.0 SNORD113-9-201 snoRNA frontal cortex (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 6490.00 46.35 10.36 100.0 SNORD115-20-201 snoRNA frontal cortex (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 17043.00 86.91 27.20 100.0 SNORD38A-201 snoRNA frontal cortex (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 281.00 1.43 0.45 100.0 SNORD38A-201 snoRNA frontal cortex (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1076.00 5.49 1.72 100.0 SNORD38A-201 snoRNA frontal cortex (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 32086.00 91.47 51.20 97.29 SNORD114-20-201 snoRNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 3698.00 15.11 5.90 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1352.00 5.52 2.16 61.99 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 421.00 1.72 0.67 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 571.00 2.33 0.91 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1319.00 5.39 2.10 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 1499.00 6.13 2.39 88.86 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 79.00 0.32 0.13 100.0 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 3118.00 12.74 4.98 80.46 7SK.1-201 misc RNA frontal cortex (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 3306.00 13.51 5.28 79.95 7SK.1-201 misc RNA frontal cortex (Tissue)