ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 13500.00 39.55 21.54 100.0 SNORD115-30-201 snoRNA frontal cortex (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 18680.29 24.23 29.81 70.09 RNY1-201 misc RNA frontal cortex (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 18554.00 24.06 29.61 100.0 RNY1-201 misc RNA frontal cortex (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 4949.63 6.42 7.90 28.88 RNY1-201 misc RNA frontal cortex (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 2131.00 2.76 3.40 100.0 RNY1-201 misc RNA frontal cortex (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 470.00 0.61 0.75 100.0 RNY1-201 misc RNA frontal cortex (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 26184.00 32.58 41.79 100.0 SNORD115-42-201 snoRNA frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 759.20 10.02 1.21 43.94 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 467.46 6.17 0.75 77.39 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 154.00 2.03 0.25 100.0 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 25.00 0.33 0.04 100.0 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 72.78 0.96 0.12 11.89 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 91.00 1.20 0.15 100.0 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 2.00 0.03 0.00 100.0 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 337.00 4.45 0.54 100.0 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 22.00 0.29 0.04 100.0 RNA5SP202-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 7908.00 48.14 12.62 100.0 SNORD114-9-201 snoRNA frontal cortex (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 6718.00 40.89 10.72 100.0 SNORD114-9-201 snoRNA frontal cortex (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1019.00 3.64 1.63 100.0 Y_RNA.234-201 misc RNA frontal cortex (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 3.00 0.04 0.00 100.0 RNA5S9-201 rRNA frontal cortex (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 9936.00 63.70 15.86 100.0 SNORD115-23-201 snoRNA frontal cortex (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 21.00 1.12 0.03 100.0 RNA5SP141-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 499.00 61.23 0.80 100.0 SNORD114-15-201 snoRNA frontal cortex (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1621.00 40.22 2.59 100.0 ENST00000364722 snoRNA frontal cortex (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 31945.00 36.87 50.98 100.0 SNORD115-15-201 snoRNA frontal cortex (Tissue)