ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 220.00 92.05 0.35 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 135.00 0.99 0.22 67.84 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 64.00 0.47 0.10 32.16 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 7923.00 58.39 12.64 92.88 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 3406.94 20.49 5.44 28.11 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 230.00 1.38 0.37 63.54 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 10121.12 60.87 16.15 75.62 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 13707.00 88.91 21.87 94.27 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 15.00 0.86 0.02 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 2052.00 29.03 3.27 78.92 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 486.00 0.07 0.78 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 553.00 0.60 0.88 53.12 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 122.00 27.29 0.19 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 1143.00 39.02 1.82 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 702620.00 97.62 1121.27 99.84 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 35.00 0.41 0.06 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 1459.00 17.15 2.33 67.61 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 2929.00 82.09 4.67 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 161.00 33.13 0.26 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 3870.00 70.80 6.18 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 37550.00 95.34 59.92 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 4265.00 90.23 6.81 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 25911.00 85.09 41.35 98.43 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 103.00 0.34 0.16 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 1465.00 0.21 2.34 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA frontal cortex (Tissue)