ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 1100.00 25.38 1.76 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 156.00 3.60 0.25 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 1.00 0.02 0.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 240.00 0.10 0.38 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 79.00 20.95 0.13 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 342.00 26.13 0.55 55.88 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 20.00 1.53 0.03 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 270.00 20.63 0.43 44.12 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 2260.00 51.29 3.61 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 1.00 0.02 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 64.00 22.54 0.10 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 2942.00 91.82 4.69 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 481.00 59.83 0.77 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 43.00 0.14 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 11.00 0.04 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 11.00 0.04 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 20.00 0.07 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 54.00 0.18 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 11.00 0.04 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 5870.00 2.55 9.37 97.23 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 133.00 0.06 0.21 56.36 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 67.00 0.03 0.11 62.04 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 766.00 18.23 1.22 43.6 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 218.00 89.34 0.35 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 216.00 13.55 0.34 96.86 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA frontal cortex (Tissue)