ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 71.00 22.26 0.11 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 546.00 33.41 0.87 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 595.00 40.81 0.95 88.28 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 627.00 0.09 1.00 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 1697.00 45.13 2.71 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 685.00 16.30 1.09 97.44 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 1.00 0.02 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 231.00 5.50 0.37 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1393.00 49.43 2.22 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 2187.00 2.39 3.49 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 1377.00 1.50 2.20 83.15 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 33.00 0.04 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 352.00 0.38 0.56 88.66 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 8840.00 9.66 14.11 46.2 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 823.00 0.90 1.31 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 12.00 0.01 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 46.00 20.72 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 57.00 0.03 0.09 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1398.00 71.99 2.23 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 106.00 5.46 0.17 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 490.00 25.80 0.78 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 11.00 0.19 0.02 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 2.00 0.00 0.00 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 367.00 0.21 0.59 67.96 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 379.00 16.87 0.60 76.88 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA frontal cortex (Tissue)