ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 5477.98 10.05 8.74 44.41 ENST00000823279 lncRNA frontal cortex (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 5771.94 10.59 9.21 45.91 ENST00000823801 lncRNA frontal cortex (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 136.00 41.46 0.22 47.72 ENST00000827714 lncRNA frontal cortex (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 149.00 45.43 0.24 52.28 ENST00000827714 lncRNA frontal cortex (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 1540.00 3.26 2.46 100.0 GAS5-377 lncRNA frontal cortex (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 476.00 1.01 0.76 100.0 GAS5-377 lncRNA frontal cortex (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1138.00 2.41 1.82 100.0 GAS5-377 lncRNA frontal cortex (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 41940.00 88.80 66.93 100.0 GAS5-377 lncRNA frontal cortex (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 5.00 62.50 0.01 100.0 MIR205HG-245 lncRNA frontal cortex (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 332.00 13.15 0.53 100.0 TAF12-DT-204 lncRNA frontal cortex (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 389262.00 94.00 621.20 99.67 ZFAS1-238 lncRNA frontal cortex (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1799.00 0.43 2.87 100.0 ZFAS1-238 lncRNA frontal cortex (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 6837.00 1.65 10.91 100.0 ZFAS1-238 lncRNA frontal cortex (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1521.00 0.37 2.43 100.0 ZFAS1-238 lncRNA frontal cortex (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 10924.00 10.44 17.43 100.0 ZFAS1-242 lncRNA frontal cortex (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 89339.00 85.38 142.57 100.0 ZFAS1-242 lncRNA frontal cortex (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 79.00 44.38 0.13 100.0 ENST00000837997 lncRNA frontal cortex (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 21.00 11.80 0.03 100.0 ENST00000837997 lncRNA frontal cortex (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 7005.00 70.65 11.18 80.0 ENST00000839036 lncRNA frontal cortex (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 23.00 12.92 0.04 100.0 ENST00000849527 lncRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 3819.00 72.45 6.09 87.73 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 2.00 0.04 0.00 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 2739.00 0.38 4.37 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 789.00 60.09 1.26 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 227.00 17.29 0.36 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA frontal cortex (Tissue)