ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 11518.00 3.50 18.38 87.49 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 242.00 0.07 0.39 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 3750.00 1.14 5.98 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 25.00 0.01 0.04 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 6277.00 1.91 10.02 98.99 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 3664.00 3.04 5.85 62.58 SNHG14-323 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 331125.00 94.79 528.42 99.19 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 933.00 0.27 1.49 58.64 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 999.00 0.29 1.59 56.73 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 7289.00 2.09 11.63 90.4 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 510.00 0.15 0.81 100.0 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 84945.00 77.27 135.56 92.38 SNHG14-336 lncRNA frontal cortex (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 21261.00 19.34 33.93 38.2 SNHG14-336 lncRNA frontal cortex (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 47100.00 75.65 75.16 95.18 SNHG14-341 lncRNA frontal cortex (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1656.00 45.66 2.64 100.0 NCL-211 retained intron frontal cortex (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 717.00 6.69 1.14 100.0 FMN2-209 protein coding CDS not defined frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 7.00 0.13 0.01 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 143.00 2.67 0.23 70.1 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 519.00 9.67 0.83 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 489.00 9.11 0.78 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 371.00 6.92 0.59 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 61.00 1.14 0.10 29.9 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 48104.00 85.13 76.77 100.0 MIR124-1HG-216 lncRNA frontal cortex (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 212.00 13.89 0.34 100.0 SNHG10-212 lncRNA frontal cortex (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 20789.01 28.38 33.18 29.32 SNHG19-202 lncRNA frontal cortex (Tissue)