ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 12115.00 0.28 19.33 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 346.00 0.01 0.55 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 3573.00 0.08 5.70 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 57638.00 1.33 91.98 69.68 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1947.00 0.04 3.11 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 551757.00 12.70 880.52 98.29 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 3100.00 0.07 4.95 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1631.00 0.04 2.60 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 2.00 0.00 0.00 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 174331.00 4.01 278.20 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2609.00 0.06 4.16 73.45 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 742.40 0.02 1.18 51.38 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 25.00 0.00 0.04 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 3794.00 0.09 6.05 63.04 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1267.00 0.03 2.02 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 1127.00 0.03 1.80 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 930.00 0.02 1.48 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 424327.00 41.38 677.16 100.0 SNHG14-315 lncRNA frontal cortex (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 242557.00 23.65 387.08 91.98 SNHG14-315 lncRNA frontal cortex (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 249880.00 24.37 398.77 85.87 SNHG14-315 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 3885.00 1.18 6.20 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 116878.10 35.50 186.52 43.84 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 189.00 0.06 0.30 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 489.00 0.15 0.78 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 169403.39 51.45 270.34 58.94 SNHG5-273 lncRNA frontal cortex (Tissue)