ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 157.00 1.46 0.25 100.0 ENST00000666735 lncRNA frontal cortex (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 3904.00 36.37 6.23 100.0 ENST00000666735 lncRNA frontal cortex (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 13982.00 88.55 22.31 100.0 MEG8-242 lncRNA frontal cortex (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 28884.85 24.63 46.10 30.7 SNHG14-312 lncRNA frontal cortex (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 65970.50 56.25 105.28 70.11 SNHG14-312 lncRNA frontal cortex (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 3494.00 2.98 5.58 100.0 SNHG14-312 lncRNA frontal cortex (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 479.00 0.72 0.76 100.0 MEG8-244 lncRNA frontal cortex (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1016.00 1.53 1.62 100.0 MEG8-244 lncRNA frontal cortex (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 63380.00 95.63 101.14 99.93 MEG8-244 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 694.00 0.02 1.11 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 9.00 0.00 0.01 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 8001.00 0.18 12.77 99.5 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 651.25 0.01 1.04 45.07 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 5547.00 0.13 8.85 89.63 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 2597314.00 59.79 4144.90 98.97 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1986.00 0.05 3.17 68.41 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 119291.00 2.75 190.37 99.5 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 15072.00 0.35 24.05 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 593138.00 13.65 946.55 99.82 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 294.00 0.01 0.47 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 2473.00 0.06 3.95 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 2605.00 0.06 4.16 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 2765.00 0.06 4.41 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 282.00 0.01 0.45 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 588.00 0.01 0.94 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)