ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 4840.00 75.57 7.72 100.0 ENST00000625572 miRNA frontal cortex (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 30299.00 96.25 48.35 100.0 ENST00000628177 snoRNA frontal cortex (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 3629.00 93.68 5.79 100.0 ENST00000630615 snoRNA frontal cortex (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 124.00 79.49 0.20 100.0 DMRT2-209 protein coding frontal cortex (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 7.00 4.49 0.01 100.0 DMRT2-209 protein coding frontal cortex (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 985.00 10.35 1.57 100.0 SNORD98-201 snoRNA frontal cortex (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 6833.00 71.77 10.90 100.0 SNORD98-201 snoRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 236032.09 50.15 376.67 52.13 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 174.83 0.04 0.28 19.67 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 124.00 0.03 0.20 100.0 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 676.48 0.14 1.08 76.09 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 6144.00 54.42 9.80 100.0 MEG8-222 lncRNA frontal cortex (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 2480.00 21.97 3.96 100.0 MEG8-222 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 37582.00 6.97 59.97 93.91 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 215221.00 39.91 343.46 92.69 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 71540.00 13.27 114.17 100.0 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 29906.00 5.55 47.73 90.83 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 903.00 0.17 1.44 100.0 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 13379.00 2.48 21.35 53.12 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 78866.00 14.63 125.86 84.27 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 27857.00 5.17 44.46 53.59 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 945.34 30.65 1.51 69.56 5S_rRNA.20-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 450.00 7.19 0.72 100.0 HSPA9-211 retained intron frontal cortex (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 929.00 14.85 1.48 31.88 HSPA9-211 retained intron frontal cortex (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 2265.00 90.42 3.61 100.0 DNM3OS-205 lncRNA frontal cortex (Tissue)