ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 307.00 4.67 0.49 100.0 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 98.00 1.49 0.16 100.0 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1703.00 25.91 2.72 59.07 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 37.79 0.58 0.06 59.99 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 4.00 100.00 0.01 100.0 MIR7974-201 miRNA frontal cortex (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 32.00 31.68 0.05 100.0 MIR376A1-201 miRNA frontal cortex (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 22.00 21.78 0.04 100.0 MIR376A1-201 miRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1722.00 0.57 2.75 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1704.09 0.56 2.72 33.92 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 242560.00 79.76 387.09 99.55 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 1.00 0.00 0.00 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 8356.00 2.75 13.33 67.61 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 5311.00 1.75 8.48 48.22 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 3410.00 1.12 5.44 86.99 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 3651.01 1.20 5.83 72.67 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 792.00 0.26 1.26 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 11.00 0.00 0.02 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 56.00 0.02 0.09 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 164.00 0.05 0.26 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 5624.83 1.85 8.98 52.77 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4340.21 1.43 6.93 45.45 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 3472.00 1.16 5.54 100.0 U2.6-201 snRNA frontal cortex (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 1455.00 1.42 2.32 56.88 ENST00000619323 lncRNA frontal cortex (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 97931.00 95.25 156.28 98.18 ENST00000619323 lncRNA frontal cortex (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 135.00 15.43 0.22 100.0 SCARNA4-202 scaRNA frontal cortex (Tissue)