ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 143429.00 64.83 228.89 100.0 SNHG14-220 retained intron frontal cortex (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 67530.00 30.52 107.77 100.0 SNHG14-220 retained intron frontal cortex (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 522.00 99.43 0.83 100.0 TEKT4P2-201 transcribed unprocessed pseudogene frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 316811.00 96.27 505.58 99.17 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 24.00 0.01 0.04 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1121.00 0.34 1.79 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 373.00 0.11 0.60 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 202.00 0.06 0.32 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 4.00 0.04 0.01 100.0 ENST00000563103 lncRNA frontal cortex (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 218.00 2.10 0.35 100.0 RPL4-207 retained intron frontal cortex (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 6768.00 65.23 10.80 100.0 RPL4-207 retained intron frontal cortex (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 439.00 23.23 0.70 90.7 ENST00000565336 lncRNA frontal cortex (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 930.00 49.21 1.48 90.03 ENST00000565336 lncRNA frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 4338.00 0.78 6.92 100.0 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 886.00 0.16 1.41 100.0 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 3695.00 0.66 5.90 100.0 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 451228.00 80.84 720.09 83.93 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 6581.00 63.97 10.50 100.0 RPL4-214 retained intron frontal cortex (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 274.00 2.66 0.44 100.0 RPL4-214 retained intron frontal cortex (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 164.00 1.44 0.26 100.0 POLG-DT-202 lncRNA frontal cortex (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 4986.01 43.83 7.96 69.13 POLG-DT-202 lncRNA frontal cortex (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 3046.11 26.78 4.86 42.98 POLG-DT-202 lncRNA frontal cortex (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2189.00 65.93 3.49 100.0 ENST00000570843 lncRNA frontal cortex (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 6604.00 76.36 10.54 100.0 MIR497HG-207 lncRNA frontal cortex (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 112566.00 99.13 179.64 99.54 MIR22HG-212 lncRNA frontal cortex (Tissue)