ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2329.00 1.28 3.72 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 2509.00 1.37 4.00 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2649.00 1.45 4.23 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 168126.00 92.13 268.30 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1369.00 57.81 2.18 68.86 SNORD70-201 snoRNA frontal cortex (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 111.00 5.58 0.18 100.0 B4GALNT2-202 protein coding frontal cortex (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 1276.00 64.09 2.04 77.9 B4GALNT2-202 protein coding frontal cortex (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 3026.00 90.17 4.83 100.0 NDE1-202 protein coding frontal cortex (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 11.00 68.75 0.02 100.0 MIR208B-201 miRNA frontal cortex (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 168.00 70.59 0.27 100.0 MIR450B-201 miRNA frontal cortex (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 401.00 55.08 0.64 100.0 MIR887-201 miRNA frontal cortex (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 4868.00 91.52 7.77 100.0 MIR889-201 miRNA frontal cortex (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 6829.00 84.19 10.90 100.0 SNORD111-201 snoRNA frontal cortex (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 2573.00 66.03 4.11 84.75 SNORD88A-201 snoRNA frontal cortex (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 370.00 93.91 0.59 100.0 MIR548K-201 miRNA frontal cortex (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 585.00 58.21 0.93 100.0 MIR320B2-201 miRNA frontal cortex (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 7901.00 94.79 12.61 100.0 MIR1271-201 miRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 59.00 0.16 0.09 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 32872.00 88.05 52.46 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1818.00 4.87 2.90 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 345.00 0.92 0.55 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2272.00 70.82 3.63 100.0 SNORD111B-201 snoRNA frontal cortex (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 2523.00 53.41 4.03 100.0 RNU2-36P-201 snRNA frontal cortex (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 51.00 1.08 0.08 100.0 RNU2-36P-201 snRNA frontal cortex (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 60273.00 96.30 96.19 99.33 SNORD19C-201 snoRNA frontal cortex (Tissue)