ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 1392.00 0.49 2.22 100.0 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 210291.00 74.37 335.59 92.18 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 3516.00 1.24 5.61 100.0 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1112.00 0.39 1.77 73.11 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1627.00 6.08 2.60 100.0 MT-RNR1-201 Mt rRNA frontal cortex (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3937.00 79.18 6.28 100.0 MIR454-201 miRNA frontal cortex (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 415.00 67.81 0.66 100.0 MIR501-201 miRNA frontal cortex (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 11156.00 93.43 17.80 100.0 MIR769-201 miRNA frontal cortex (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 47.00 88.68 0.08 100.0 KRTAP19-1-201 protein coding frontal cortex (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 987.00 15.71 1.58 100.0 MIR708-201 miRNA frontal cortex (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 18.00 85.71 0.03 100.0 MIR509-3-201 miRNA frontal cortex (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 113.00 51.60 0.18 100.0 MIR543-201 miRNA frontal cortex (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 343.00 98.00 0.55 100.0 MIR301B-201 miRNA frontal cortex (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 3942.00 55.23 6.29 85.51 RNU1-82P-201 snRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4695.00 30.97 7.49 78.6 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 24.00 0.16 0.04 100.0 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 641.00 4.23 1.02 100.0 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 4347.00 28.67 6.94 100.0 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 558.00 77.72 0.89 100.0 U3.17-201 snoRNA frontal cortex (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1997.00 45.03 3.19 100.0 SNORD17-201 snoRNA frontal cortex (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 54.00 58.06 0.09 100.0 SNORD72-201 snoRNA frontal cortex (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2532.00 74.47 4.04 100.0 SNORD70B-201 snoRNA frontal cortex (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 9773.00 77.50 15.60 97.04 RNY4P18-201 misc RNA frontal cortex (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 150448.00 96.50 240.09 100.0 SNORD90-201 snoRNA frontal cortex (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 971.00 0.62 1.55 12.15 SNORD90-201 snoRNA frontal cortex (Tissue)