ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 1560.00 1.02 3.01 100.0 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 315.00 0.21 0.61 46.6 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 87286.00 57.07 168.52 93.45 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 27168.00 79.74 52.45 100.0 GNL3-211 retained intron cerebellum (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 3902.00 11.45 7.53 100.0 GNL3-211 retained intron cerebellum (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 791.00 18.06 1.53 100.0 RPL5-205 retained intron cerebellum (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 2498.00 57.02 4.82 100.0 RPL5-205 retained intron cerebellum (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 123.00 4.26 0.24 100.0 ZBED9-AS1-201 lncRNA cerebellum (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 13104.00 90.77 25.30 100.0 RPS3A-206 retained intron cerebellum (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 53659.00 94.99 103.60 100.0 COX7C-203 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 11123.00 3.15 21.48 87.73 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 89693.38 25.39 173.17 33.75 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1630.00 0.46 3.15 100.0 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 234295.12 66.32 452.36 72.15 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 131792.00 49.83 254.45 85.9 RACK1-230 retained intron cerebellum (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 128472.00 48.58 248.04 74.83 RACK1-230 retained intron cerebellum (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 24.00 17.02 0.05 100.0 RNA5SP486-201 rRNA pseudogene cerebellum (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1741.00 81.28 3.36 100.0 SCARNA5-201 scaRNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 120.00 0.03 0.23 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 4844.00 1.24 9.35 56.17 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 26734.00 6.83 51.62 68.65 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1746.00 0.45 3.37 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 35152.00 8.98 67.87 69.11 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 736.00 0.19 1.42 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 930.00 0.24 1.80 56.92 RNY4-201 misc RNA cerebellum (Tissue)