ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 110263.00 38.26 210.55 100.0 SNHG14-315 lncRNA uterus (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 70541.00 24.47 134.70 89.84 SNHG14-315 lncRNA uterus (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 65017.00 22.56 124.15 84.1 SNHG14-315 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2901.00 0.66 5.54 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 107006.81 24.32 204.33 32.24 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 368.00 0.08 0.70 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 1546.00 0.35 2.95 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 255101.65 57.97 487.11 70.32 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 22340.00 5.08 42.66 87.24 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 360.00 0.08 0.69 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 3259.00 0.74 6.22 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 316.00 0.07 0.60 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 4.00 0.00 0.01 80.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 7642.00 1.74 14.59 99.43 SNHG5-273 lncRNA uterus (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 2951.00 17.05 5.63 64.52 SNHG14-323 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 2604.00 0.38 4.97 64.2 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 654375.00 94.51 1249.52 99.45 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 2059.00 0.30 3.93 48.65 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 12088.00 1.75 23.08 88.8 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 1481.00 0.21 2.83 100.0 MEG8-251 lncRNA uterus (Tissue)
ENST00000670697.1 ENST00000670697.1_226_313_+ 226–313 1.00 0.00 0.00 100.0 SNHG14-336 lncRNA uterus (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 31861.00 70.90 60.84 92.32 SNHG14-336 lncRNA uterus (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 10014.00 22.28 19.12 43.25 SNHG14-336 lncRNA uterus (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 12148.00 64.87 23.20 92.07 SNHG14-341 lncRNA uterus (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 447.00 7.64 0.85 100.0 NCL-211 retained intron uterus (Tissue)