ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 9301.00 0.31 17.76 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 147591.00 4.87 281.82 99.15 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 648.00 0.02 1.24 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1010.00 0.03 1.93 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 733.00 0.02 1.40 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 5981.00 0.20 11.42 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 539.00 0.02 1.03 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 739.00 0.02 1.41 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 27919.00 0.92 53.31 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 122.00 0.00 0.23 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2777.00 0.09 5.30 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 60242.00 1.99 115.03 65.11 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 2215.00 0.07 4.23 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 376244.00 12.41 718.44 97.98 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 4914.00 0.16 9.38 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1347.00 0.04 2.57 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 5.00 0.00 0.01 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 202402.00 6.68 386.49 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 6400.00 0.21 12.22 78.94 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1119.01 0.04 2.14 56.06 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 529.00 0.02 1.01 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 6630.00 0.22 12.66 65.47 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1419.00 0.05 2.71 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 12722.00 0.42 24.29 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1049.00 0.03 2.00 100.0 SNHG1-248 lncRNA uterus (Tissue)