ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 862.00 0.05 1.65 100.0 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 1372373.43 78.59 2620.54 83.78 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 346792.84 19.86 662.20 20.25 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 4485.00 0.26 8.56 86.2 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 148.00 0.01 0.28 100.0 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 17.00 0.00 0.03 100.0 C19orf48P-203 retained intron uterus (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 35.00 60.34 0.07 100.0 ENST00000597420 lncRNA uterus (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 1347.00 12.32 2.57 100.0 RPS11-206 retained intron uterus (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 8579.00 78.48 16.38 100.0 RPS11-206 retained intron uterus (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 1146254.00 63.63 2188.76 65.35 CARMN-209 lncRNA uterus (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 5262.00 39.28 10.05 100.0 ENST00000602478 lncRNA uterus (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 2.00 25.00 0.00 100.0 PPFIA1P1-201 processed pseudogene uterus (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 1468.00 18.09 2.80 100.0 SNORD114-21-201 snoRNA uterus (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 4565.00 56.27 8.72 100.0 SNORD114-21-201 snoRNA uterus (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 255.00 32.73 0.49 100.0 SNORD115-40-201 snoRNA uterus (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 39540.00 98.36 75.50 100.0 MIR98-201 miRNA uterus (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 41371.00 96.13 79.00 100.0 SNORD113-5-201 snoRNA uterus (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 1862.00 90.17 3.56 100.0 MIR15A-201 miRNA uterus (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 647.00 82.21 1.24 100.0 MIR376C-201 miRNA uterus (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 594.00 44.00 1.13 100.0 SNHG21-206 retained intron uterus (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 438.00 24.99 0.84 100.0 SNORD11B-201 snoRNA uterus (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 7965.00 76.73 15.21 100.0 SNORD91B-201 snoRNA uterus (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 1.00 20.00 0.00 100.0 MIR219A2HG-201 lncRNA uterus (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 27893.00 64.49 53.26 75.13 SNORD91A-201 snoRNA uterus (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 12495.00 47.74 23.86 97.34 MIR486-1-201 miRNA uterus (Tissue)