ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 76947.00 38.60 146.93 95.46 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 85378.00 42.83 163.03 96.67 RPL17-211 retained intron uterus (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 5026.00 57.57 9.60 71.66 ENST00000582320 lncRNA uterus (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 532.00 6.09 1.02 100.0 ENST00000582320 lncRNA uterus (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 850.00 9.74 1.62 100.0 ENST00000582320 lncRNA uterus (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 1982.00 2.19 3.78 100.0 RPL17-214 retained intron uterus (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 41125.25 45.41 78.53 54.03 RPL17-214 retained intron uterus (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 45331.00 50.05 86.56 55.04 RPL17-214 retained intron uterus (Tissue)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 300.00 0.11 0.57 100.0 SNORD43-201 snoRNA uterus (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 280682.00 98.36 535.96 99.96 SNORD43-201 snoRNA uterus (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 355.00 0.12 0.68 100.0 SNORD43-201 snoRNA uterus (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 731.00 36.01 1.40 100.0 MIR151B-201 miRNA uterus (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 190.00 0.66 0.36 100.0 SNORD3A-201 snoRNA uterus (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 48800.00 90.94 93.18 100.0 SNORD92-201 snoRNA uterus (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 7377.00 46.49 14.09 100.0 NSRP1-214 protein coding uterus (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 6336.00 39.93 12.10 83.78 NSRP1-214 protein coding uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 111.00 0.35 0.21 100.0 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 11506.00 36.18 21.97 95.38 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 7163.00 22.52 13.68 89.0 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 4010.00 12.61 7.66 80.28 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 5087.00 16.00 9.71 81.84 MIR23AHG-201 lncRNA uterus (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 61.00 44.53 0.12 100.0 ODAD3-204 nonsense mediated decay uterus (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 376.00 0.43 0.72 100.0 VMP1-217 retained intron uterus (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 10.00 0.01 0.02 100.0 VMP1-217 retained intron uterus (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 48504.00 54.89 92.62 59.88 VMP1-217 retained intron uterus (Tissue)