ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 863.00 0.08 1.65 100.0 RPL21-209 retained intron uterus (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 377.00 34.46 0.72 100.0 GABRE-209 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 87.00 0.01 0.17 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 1496.00 0.25 2.86 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 44728.00 7.60 85.41 78.73 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 3477.00 0.59 6.64 57.73 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 1302.00 0.22 2.49 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 453895.00 77.15 866.71 98.5 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 18.00 0.00 0.03 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 7591.00 1.29 14.49 100.0 RPL13A-212 retained intron uterus (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 1419.00 8.35 2.71 100.0 RPL7A-207 protein coding CDS not defined uterus (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 9991.00 58.82 19.08 88.83 RPL7A-207 protein coding CDS not defined uterus (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 216.00 1.27 0.41 100.0 RPL7A-207 protein coding CDS not defined uterus (Tissue)
ENST00000489392.1 ENST00000489392.1_110_189_+ 110–189 1.00 0.01 0.00 100.0 RPL7A-207 protein coding CDS not defined uterus (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 7017.00 8.33 13.40 100.0 RN7SL2-201 misc RNA uterus (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 1158.00 1.37 2.21 36.84 RN7SL2-201 misc RNA uterus (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 38938.00 56.80 74.35 75.74 NOP56-217 protein coding CDS not defined uterus (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 9545.00 13.92 18.23 86.11 NOP56-217 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 680.00 0.42 1.30 46.35 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 832.00 0.51 1.59 100.0 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 756.00 0.47 1.44 100.0 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 787.00 0.49 1.50 53.65 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 77209.00 47.73 147.43 87.51 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 58484.00 36.15 111.67 97.4 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 63.00 0.04 0.12 100.0 RABGGTB-213 protein coding CDS not defined uterus (Tissue)