ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 3303.00 11.20 6.31 53.03 TMEM107-204 protein coding uterus (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1982.00 6.72 3.78 100.0 TMEM107-204 protein coding uterus (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 127.00 0.43 0.24 100.0 TMEM107-204 protein coding uterus (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 1051.00 17.63 2.01 100.0 SNHG16-201 lncRNA uterus (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 3983.00 66.83 7.61 92.2 SNHG16-201 lncRNA uterus (Tissue)
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 124.00 19.14 0.24 100.0 SNHG14-207 lncRNA uterus (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 162230.00 88.85 309.78 96.66 SNORD105B-201 snoRNA uterus (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 8631.00 54.92 16.48 77.15 SNORD121B-201 snoRNA uterus (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 715.00 0.52 1.37 100.0 SNORD127-201 snoRNA uterus (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 129843.00 93.56 247.93 99.18 SNORD127-201 snoRNA uterus (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 26904.00 94.10 51.37 100.0 SNORD42B-201 snoRNA uterus (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 105.00 0.69 0.20 100.0 RNY4P25-201 misc RNA uterus (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 2436.00 70.69 4.65 100.0 SNORD121A-201 snoRNA uterus (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 14810.00 71.92 28.28 87.85 SNORD126-201 snoRNA uterus (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 4457.00 21.65 8.51 71.98 SNORD126-201 snoRNA uterus (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 85472.00 92.78 163.21 96.96 SNORD124-201 snoRNA uterus (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 92.00 2.02 0.18 100.0 SNHG12-201 retained intron uterus (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 21652.00 36.93 41.34 96.48 RPL3-212 retained intron uterus (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 16978.00 28.95 32.42 100.0 RPL3-212 retained intron uterus (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 40734.00 96.62 77.78 100.0 SMC1A-204 retained intron uterus (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 81773.00 88.08 156.14 98.64 RABGGTB-208 protein coding CDS not defined uterus (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 14135.00 47.42 26.99 75.96 DDX39B-219 retained intron uterus (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 1120.00 3.76 2.14 100.0 DDX39B-219 retained intron uterus (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 1416.00 4.75 2.70 100.0 DDX39B-219 retained intron uterus (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 6963.00 68.67 13.30 100.0 RPS8-206 protein coding CDS not defined uterus (Tissue)