ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 6236.00 76.32 11.91 100.0 SNORD70B-201 snoRNA uterus (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 9728.00 68.62 18.58 94.42 RNY4P18-201 misc RNA uterus (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 85813.00 93.94 163.86 100.0 SNORD90-201 snoRNA uterus (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 462.00 0.51 0.88 8.87 SNORD90-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2277.00 0.66 4.35 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 319955.00 93.28 610.95 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2741.00 0.80 5.23 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 3384.00 0.99 6.46 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 4457.00 59.83 8.51 75.01 SNORD70-201 snoRNA uterus (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 194.00 2.09 0.37 100.0 B4GALNT2-202 protein coding uterus (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 6958.00 75.02 13.29 84.83 B4GALNT2-202 protein coding uterus (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 904.00 89.50 1.73 100.0 NDE1-202 protein coding uterus (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 1026.00 59.41 1.96 100.0 MIR450B-201 miRNA uterus (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 674.00 61.61 1.29 100.0 MIR887-201 miRNA uterus (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 1960.00 89.17 3.74 100.0 MIR889-201 miRNA uterus (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 5171.00 78.03 9.87 100.0 SNORD111-201 snoRNA uterus (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 8014.00 69.88 15.30 86.28 SNORD88A-201 snoRNA uterus (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 286.00 95.02 0.55 100.0 MIR548K-201 miRNA uterus (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 970.00 68.45 1.85 100.0 MIR320B2-201 miRNA uterus (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 76.00 92.68 0.15 100.0 MIR1271-201 miRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 1153.00 0.24 2.20 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 454756.00 96.41 868.35 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1671.00 0.35 3.19 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 387.00 0.08 0.74 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1915.00 67.33 3.66 100.0 SNORD111B-201 snoRNA uterus (Tissue)